PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62474.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 177aa    MW: 20041 Da    PI: 8.6266
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62474.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-101664455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ++  rEr RR+++N++f+eL  ll +    +  K +K + L  A++ I++L+
  EPS62474.1 16 SKACRERLRREKLNERFSELSALLEPG---RPVKTDKLALLGDAIKVINQLK 64
                5678**********************8...89******************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-131178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.4841263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-71666No hitNo description
PfamPF000103.3E-81663IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-111786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-101869IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
FRFCRPRSDA CNSVASKACR ERLRREKLNE RFSELSALLE PGRPVKTDKL ALLGDAIKVI  60
NQLKSESDEY RETNERLLEE IKMLKAEKNE LRQEKNVIKN EKEMIEHQLK TLSGAPPPPP  120
PRPPTSHGFI PGLPPVYHTN ASKVSVIPSY GFVPMWQYLP VGCGDTSEDH ELRPPAA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073517.12e-74PREDICTED: transcription factor bHLH104
SwissprotQ8L4677e-59BH104_ARATH; Transcription factor bHLH104
TrEMBLS8C6S91e-128S8C6S9_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0010s08360.16e-65(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47622132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.29e-50bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]